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Data include soil and litter measurements for moisture, pH, and carbon-to-nitrogen ratio. Samples were collected from 8 different ecoregions, as determined by NEON, at various NEON/LTER and/or other experimental sites. Soil cores and litter samples were taken in the spring and fall of 2022. 

Plant litter decomposition is a primary control on carbon fluxes in terrestrial ecosystems around the world. Individually, the key mediators of decomposition rates—litter traits, temperature, and moisture—are relatively well understood. However, our understanding of how combined drivers influence decomposition remains limited. To test how multiple, interactive climate change factors directly alter decomposition rates and indirectly influence leaf litter decomposition rates by altering substrate chemistry, we conducted two decomposition experiments within the Boreal Forest Warming at an Ecotone in Danger (B4WarmED) study in Minnesota, USA. Our first experiment decomposed ambient-grown leaf litter from eight common tree species under a factorial combination of warming and rainfall reduction treatments. We found that the direct effects of combined warming and rainfall reduction increased litter half-life by 42% ± 11% in comparison to ambient plots with no warming or rainfall reduction. In contrast, only rainfall reduction influenced litter mean residence time, which increased by 37% ± 18% in comparison to ambient rainfall plots. Our second experiment decomposed ambient- and warm-grown leaf litter from the same eight species under ambient and warmed conditions. We found that warming slowed decomposition of both litter types, but warm-grown litter had a 22% ± 6.5% shorter half-life than ambient-grown leaf tissue under ambient environmental conditions. Warm grown litter half-life then increased by 36% ± 11% with warmed environmental conditions. Our results highlight that climate change could slow carbon and nutrient cycling in systems where moisture becomes a limiting factor. In addition, our study demonstrates that there may be an overlooked relationship between the growth conditions of plants and the temperature of decomposition. This nuanced understanding of decomposition can then support carbon cycling models and more effective nature-based climate mitigation efforts. 

Despite being present in many North American forest understories, the ectomycorrhizal (ECM) fungal communities associated with Corylus shrubs have received no prior study. To address this knowledge gap, we characterized the ECM fungal communities on roots of Corylus shrubs as well as co-occurring Quercus and Pinus trees in Minnesota, USA. ECM-colonized root tips from pairs of Corylus shrubs and four ECM tree species, Quercus macrocarpa, Quercus ellipsoidalis, Pinus strobus, and Pinus resinosa, growing in close proximity (<1 m), were sampled at the Cedar Creek Ecosystem Science Reserve. ECM fungal communities were assessed using high-throughput sequencing of the ITS2 region. ECM fungal operational taxonomic unit (OTU) richness was equivalent among the two Quercus species and their associated Corylus shrubs, but significantly higher on P. strobus–associated Corylus shrubs compared with P. strobus, P. resinosa, and P. resinosa–associated Corylus shrubs. ECM fungal community composition on Corylus shrubs largely mirrored that on each of the Quercus and Pinus species, although the two Pinus commu- nities were significantly different from each other. Further, the same ECM fungal OTUs were commonly encountered on paired Corylus–tree host samples, suggesting a high potential for co- colonization by the same fungal individuals. Collectively, these results support the growing consensus that woody understory plants often associate with similar ECM fungal communities as co-occurring tree hosts regardless of phylogenetic relatedness 

ABSTRACT Bacteria are major drivers of organic matter decomposition and play crucial roles in global nutrient cycling. Although the degradation of dead fungal biomass (necromass) is increasingly recognized as an important contributor to soil carbon (C) and nitrogen (N) cycling, the genes and metabolic pathways involved in necromass degradation are less characterized. In particular, how bacteria degrade necromass containing different quantities of melanin, which largely control rates of necromass decompositionin situ, is largely unknown. To address this gap, we conducted a multi-timepoint transcriptomic analysis using three Gram-negative, bacterial species grown on low or high melanin necromass ofHyaloscypha bicolor. The bacterial species,Cellvibrio japonicus, Chitinophaga pinensis, andSerratia marcescens, belong to genera known to degrade necromassin situ. We found that while bacterial growth was consistently higher on low than high melanin necromass, the CAZyme-encoding gene expression response of the three species was similar between the two necromass types. Interestingly, this trend was not shared for genes encoding nitrogen utilization, which varied inC. pinensisandS. marcescensduring growth on high vs low melanin necromass. Additionally, this study tested the metabolic capabilities of these bacterial species to grow on a diversity of C and N sources and found that the three bacteria have substantially different utilization patterns. Collectively, our data suggest that as necromass changes chemically over the course of degradation, certain bacterial species are favored based on their differential metabolic capacities.IMPORTANCEFungal necromass is a major component of the carbon (C) in soils as well as an important source of nitrogen (N) for plant and microbial growth. Bacteria associated with necromass represent a distinct subset of the soil microbiome and characterizing their functional capacities is the critical next step toward understanding how they influence necromass turnover. This is particularly important for necromass varying in melanin content, which has been observed to control the rate of necromass decomposition across a variety of ecosystems. Here we assessed the gene expression of three necromass-degrading bacteria grown on low or high melanin necromass and characterized their metabolic capacities to grow on different C and N substrates. These transcriptomic and metabolic studies provide the first steps toward assessing the physiological relevance of up-regulated CAZyme-encoding genes in necromass decomposition and provide foundational data for generating a predictive model of the molecular mechanisms underpinning necromass decomposition by soil bacteria. 

Abstract Fungal necromass is increasingly recognized as a key component of soil carbon (C) and nitrogen (N) cycling. However, how C and N loss from fungal necromass during decomposition is impacted by global change factors such as anthropogenic N addition and changes to soil C supply (e.g. via changing root exudation and rhizosphere priming) remains unclear and understudied relative to plant tissues.To address these gaps, we conducted a year‐long decomposition experiment with four species of fungal necromass incubated across four forested sites in plots that had received inorganic N and/or labile C fertilization for two decades in Minnesota, USA.We found that necromass chemistry was the primary driver of C and N loss from fungal necromass as well as the response to fertilization. Specifically, N addition suppressed late‐stage decomposition, but this effect was weaker in melanin‐rich necromass, contrary to the hypothesis based on plant litter dynamics that N addition should suppress the decomposition of more complex organic molecules. Labile C addition had no effect on either the early or late stages of necromass decomposition.Nitrogen release from necromass also varied among species, with N‐poor necromass having lower N release after controlling for differences in mass loss via regression. The relatively minor effects of N fertilization on the proportion of initial necromass N released suggest that N demand by decomposers is the primary control on N loss during fungal necromass decomposition.Synthesis. Together, our results stress the importance of the afterlife effects of fungal chemical composition to forest soil C and N cycles. Further, they demonstrate that C and N release from this critical pool can be reduced by ongoing anthropogenic N addition. 

The Ordway-Swisher Biological Station (OSBS) is a 38-km2 reserve owned by the University of Florida and is part of the National Ecological Observatory Network (NEON). The reserve contains several iconic Florida habitats, such as sandhill, mesic hammock, and scrubby flatwoods. While plants and animals have been extensively studied at OSBS, the fungi remain poorly known. Fungal inventories are critical to increase knowledge of both fungal diversity and species ranges, and thus to provide foundational data for a wide array of applications in ecology and resource management. Here, we present the results of a nine-year effort to collect, preserve, and DNA barcode the macrofungi at OSBS. This effort generated >1200 vouchered specimens and 984 ITS rDNA sequences, representing more than 546 species. Our sampling was dominated by Basidiomycota and revealed a high diversity of symbiotic ectomycorrhizal fungi, particularly species of Amanita, Cortinarius, and Russula. Sampling curves and both Chao1 and Jacknife1 richness estimators suggest that our DNA barcoding efforts captured only about half of the macrofungi species and that a more complete inventory would detect 897–1177 macrofungi species at OSBS. Our sampling found more species of macrofungi at OSBS than the known number of vertebrate animal species at the reserve and our estimates also suggest that there are likely more macrofungi species than plant species at OSBS. This study is the first comprehensive macrofungi inventory within a NEON site and highlights the importance of long-term monitoring to provide novel data on fungal diversity, community structure, conservation, biogeography, and taxonomy.